The detailed information of tRNA gene sequence


Sequence ID>WENV170686299
Genome IDLFRM01138125
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1114
End posion on genome 1189
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttattgactt
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCAACGGTCTCCAAAACCGTTGGTTGCGGGTTCGAGT
CCTGCCTCCCCTGCCA
Downstream region at tRNA end position 
aaagctagac
Secondary structure (Cloverleaf model)
>WENV170686299	Trp	CCA
                   t      GCCA aaagctagac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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