The detailed information of tRNA gene sequence


Sequence ID>WENV170686326
Genome IDLFRM01138926
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2624
End posion on genome 2536
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcattctgT
tRNA gene sequence 
GCTGAGGTAGTCTAGACCGGTAAGGCGCGGGCCTGGAAAGCCCGTGGGGCGTTGAGCCCC
TCGGGAGTTCAAATCTCCCCCTCAGCGTtt
Downstream region at tRNA end position 
tgaagttcga
Secondary structure (Cloverleaf model)
>WENV170686326	Ser	GGA
                   T      GTtt tgaagttcga
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      A G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGGGCGTTGAGCCCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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