The detailed information of tRNA gene sequence


Sequence ID>WENV170686334
Genome IDLFRM01139342
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7827
End posion on genome 7753
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaacaacagt
tRNA gene sequence 
GGGCGACTAGCTCAGCGGGAGAGCGCTTCCCTCACACGGAAGAGGTCGCAGGTTCGAAAC
CTGCGTCGCCCACCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170686334	Val	CAC
                   t      ACCA tttttatttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          A A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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