The detailed information of tRNA gene sequence


Sequence ID>WENV170686337
Genome IDLFRM01139576
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1008
End posion on genome 925
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctctttgtct
tRNA gene sequence 
GCGAGCGTGGCGGAATGGTAGACGCGCTGTCTTCAGGTGGCAGTGAGCGTATGCTCGTGC
GGGTTCAAGTCCCGCCGCTCGCACtc
Downstream region at tRNA end position 
ttcacaaacg
Secondary structure (Cloverleaf model)
>WENV170686337	Leu	CAG
                   t      ACtc ttcacaaacg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G C G G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGAGCGTATGCTCGT
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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