The detailed information of tRNA gene sequence


Sequence ID>WENV170686340
Genome IDLFRM01139771
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9152
End posion on genome 9078
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ctccaaatat
tRNA gene sequence 
GGGTCGTTAGCTCAGTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGCAGGTTCGAATC
CCGCACGACCCACCA
Downstream region at tRNA end position 
ctttccttta
Secondary structure (Cloverleaf model)
>WENV170686340	Lys	TTT
                   t      ACCA ctttccttta
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C G C C C     A
        G A        A      | |   | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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