The detailed information of tRNA gene sequence


Sequence ID>WENV170686399
Genome IDLFRM01142472
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 773
End posion on genome 849
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaggagacgt
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTAGTTCGAC
TCTACCTGGGCCCACCA
Downstream region at tRNA end position 
gggtgagggg
Secondary structure (Cloverleaf model)
>WENV170686399	Ile	GAT
                   t      ACCA gggtgagggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     C C A T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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