The detailed information of tRNA gene sequence


Sequence ID>WENV170686404
Genome IDLFRM01142826
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 17402
End posion on genome 17328
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cttgcgatgc
tRNA gene sequence 
GGGCGGATAGCTCAGCGGGAGAGCACCTGCCTTACACGCAGGGGGTCGTAGGTTCGAAAC
CTATTCCGCCCACCA
Downstream region at tRNA end position 
tacaaccgaa
Secondary structure (Cloverleaf model)
>WENV170686404	Val	TAC
                   c      ACCA tacaaccgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          A A
                    T     T A T C C     A
        G A        A      + | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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