The detailed information of tRNA gene sequence


Sequence ID>WENV170686405
Genome IDLFRM01142826
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 17311
End posion on genome 17235
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgaaaaaagt
tRNA gene sequence 
GGAGCTGTAGCTCAATTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAG
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
cttttttaac
Secondary structure (Cloverleaf model)
>WENV170686405	Asp	GTC
                   t      GCCA cttttttaac
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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