The detailed information of tRNA gene sequence


Sequence ID>WENV170686432
Genome IDLFRM01144084
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 43703
End posion on genome 43790
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccattgaaag
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTTGAAGGCAACGGTCTTGAAAACCGTCGATGGGCGACTATCC
GTGAGTTCGAATCTCACCTCCTCCGCCA
Downstream region at tRNA end position 
aatttaaaaa
Secondary structure (Cloverleaf model)
>WENV170686432	Ser	TGA
                   g      GCCA aatttaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGATGGGCGACTATCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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