The detailed information of tRNA gene sequence


Sequence ID>WENV170686487
Genome IDLFRM01146691
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 48
End posion on genome 123
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
actataggta
tRNA gene sequence 
GATTCGCTAGCTCAGCAGGTAGAGCACATCCCTTTTAAGGATGGGGTCCTGGGTTCGAAC
CCCAGGCGGATCACTA
Downstream region at tRNA end position 
tcaacacaaa
Secondary structure (Cloverleaf model)
>WENV170686487	Lys	TTT
                   a      ACTA tcaacacaaa
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C
                     C - G          C A
                    T     G A C C C     A
      C G A        A      | | | | |     G
    A       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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