The detailed information of tRNA gene sequence


Sequence ID>WENV170686547
Genome IDLFRM01150432
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 217
End posion on genome 141
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccaaacct
tRNA gene sequence 
GGAGCCGTAGTGTAGTGGTTTAACATGTCGGCCTGTCACGCCGAAGATCGCGGGTTCAAA
TCCCGTCGGCTCCGCCA
Downstream region at tRNA end position 
gtaaataact
Secondary structure (Cloverleaf model)
>WENV170686547	Asp	GTC
                   t      GCCA gtaaataact
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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