The detailed information of tRNA gene sequence


Sequence ID>WENV170686561
Genome IDLFRM01151040
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 700
End posion on genome 624
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gggttgcacc
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGTTAGAGCGCGTCCCTGATAAGGACGAGGTCCCTGGTTCGAT
TCCAGGCACGCCCACCA
Downstream region at tRNA end position 
ctggctagca
Secondary structure (Cloverleaf model)
>WENV170686561	Ile	GAT
                   c      ACCA ctggctagca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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