The detailed information of tRNA gene sequence


Sequence ID>WENV170686566
Genome IDLFRM01151453
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 180
End posion on genome 257
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccagccacct
tRNA gene sequence 
GTCCCCATCGTCTAGCTAGGTCCAGGACACCGGCCTTTCACGCCGATAACAGGGGTTCAA
ATCCCCTTGGGGACGCCA
Downstream region at tRNA end position 
agcataatca
Secondary structure (Cloverleaf model)
>WENV170686566	Glu	TTC
                   t      GCCA agcataatca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    T C G A        C      | | | | |     A
  A         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     TAAC
                    C   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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