The detailed information of tRNA gene sequence


Sequence ID>WENV170686574
Genome IDLFRM01152072
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 488
End posion on genome 413
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gccgactgtt
tRNA gene sequence 
GCCCCTCTAGCTCAACGGTTAGAGCAGCGTCCTTTTAAGTCGTGGGTTGTGGGTTCGAAT
CCCACGGGGGGCACCG
Downstream region at tRNA end position 
cgaatccctc
Secondary structure (Cloverleaf model)
>WENV170686574	Lys	TTT
                   t      ACCG cgaatccctc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G          T A
                    T     C A C C C     A
      C A A        A      | | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     GGGTT
                    G + T
                    C - G
                    G - C
                    T   T
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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