The detailed information of tRNA gene sequence


Sequence ID>WENV170686601
Genome IDLFRM01153609
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 43907
End posion on genome 43832
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gaccccagtg
tRNA gene sequence 
GCCGGGGTAGGGTAGAGGTCCATCCTGTGGCCCTGTGGAGGCTACGACCCGAGTTCGATT
CTCGGTCCCGGCCCTA
Downstream region at tRNA end position 
attatttttc
Secondary structure (Cloverleaf model)
>WENV170686601	His	GTG
                   g      CCTA attatttttc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     G G C T C     A
      A G A        A      | | | | |     G
    G       T G G G       C C G A G     C
    G         | | +                 T T
    T       T C C T
      C C A        G     CGAC
                    T - A
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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