The detailed information of tRNA gene sequence


Sequence ID>WENV170686621
Genome IDLFRM01155355
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1046
End posion on genome 1122
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctttctttac
tRNA gene sequence 
CGGGGTATGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGCCGTGGGTTCAAA
TCCCGCTACCCCGACCA
Downstream region at tRNA end position 
tgtgaatcaa
Secondary structure (Cloverleaf model)
>WENV170686621	Pro	CGG
                   c      ACCA tgtgaatcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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