The detailed information of tRNA gene sequence


Sequence ID>WENV170686626
Genome IDLFRM01155529
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 298
End posion on genome 223
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cattcgcttc
tRNA gene sequence 
GCCCCGTTCGTCTAGCGGCCTAGGACGCCGGCCTCTCACGCCGGTAACACGGGTTCAAAT
CCCGTACGGGGTACCA
Downstream region at tRNA end position 
gtcggaagcc
Secondary structure (Cloverleaf model)
>WENV170686626	Glu	CTC
                   c      ACCA gtcggaagcc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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