The detailed information of tRNA gene sequence


Sequence ID>WENV170686671
Genome IDLFRM01158404
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 327
End posion on genome 252
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ccaccattgg
tRNA gene sequence 
GCCGACTTAGCTCAGCAGGCAGAGCACTTCCATGGTAAGGAAGGGGTCGCCGGTTCGATT
CCGGCAGTCGGCTCCA
Downstream region at tRNA end position 
ggaagttaga
Secondary structure (Cloverleaf model)
>WENV170686671	Thr	GGT
                   g      TCCA ggaagttaga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T T
                    T     C G G C C     A
      C G A        A      | | | | |     G
    A       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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