The detailed information of tRNA gene sequence


Sequence ID>WENV170686722
Genome IDLFRM01160451
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4921
End posion on genome 4997
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atgccgatac
tRNA gene sequence 
GGGTGATTAGCTCAGCTGGTTAGAGTACCACGTTGACATCGTGGGGGTCGATGGTTCGAG
TCCATTATCACCCACCA
Downstream region at tRNA end position 
gaaaaaagag
Secondary structure (Cloverleaf model)
>WENV170686722	Val	GAC
                   c      ACCA gaaaaaagag
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     T T A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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