The detailed information of tRNA gene sequence


Sequence ID>WENV170686737
Genome IDLFRM01161217
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 683
End posion on genome 608
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gaaagttatc
tRNA gene sequence 
GGCCCCATCGACTAGTGGCCTAGGTCGTAACCCTCTCAAGGTTAAAACACGGGTTCGAAT
CCCGTTGGGGCTACCA
Downstream region at tRNA end position 
aatatatccc
Secondary structure (Cloverleaf model)
>WENV170686737	Glu	CTC
                   c      ACCA aatatatccc
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C A G       A C G G G     C
    G       + | | |                 T T
    C       G G T C
      C T A        G     AAAC
                    T - A
                    A - T
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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