The detailed information of tRNA gene sequence


Sequence ID>WENV170686766
Genome IDLFRM01162711
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 518
End posion on genome 593
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggagcgtat
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGTACCTGCTTTGGGAGCAGGTGGTCGTCCGTTCGAGC
CGGGCCACCCCGACCA
Downstream region at tRNA end position 
tgccaaacag
Secondary structure (Cloverleaf model)
>WENV170686766	Pro	TGG
                   t      ACCA tgccaaacag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     C G G G C     A
      T G A        A      | + | | |     G
    T       C G C G       G T C C G     C
    G       | | | +                 T T
    G       G C G T
      T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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