The detailed information of tRNA gene sequence


Sequence ID>WENV170686769
Genome IDLFRM01162973
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1423
End posion on genome 1346
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcactgctta
tRNA gene sequence 
CGGGATGTAGCGCAGCCTGGCTAGCGTACCTGCATGGGGTGCAGGTGGTCGGAGGTTCGA
ATCCTCTCATCCCGACCA
Downstream region at tRNA end position 
gaaaatcaaa
Secondary structure (Cloverleaf model)
>WENV170686769	Pro	GGG
                   a      ACCA gaaaatcaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  T         C G C G       G G A G G     C
  G         | | | +                 T T
  G         G C G T
    C T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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