The detailed information of tRNA gene sequence


Sequence ID>WENV170686800
Genome IDLFRM01163637
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 26856
End posion on genome 26931
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cccagccagt
tRNA gene sequence 
GCCGAGATAGCTCAGTTGGTAGAGCAGGGGACTGAAAATCCCCGTGTCGCTGGTTCGATT
CCGGCTCTCGGCACCA
Downstream region at tRNA end position 
ttttatgagc
Secondary structure (Cloverleaf model)
>WENV170686800	Phe	GAA
                   t      ACCA ttttatgagc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T T
                    T     C G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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