The detailed information of tRNA gene sequence


Sequence ID>WENV170686848
Genome IDLFRM01166788
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 705
End posion on genome 776
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agattactgt
tRNA gene sequence 
GCTAAGTTGGCGGAGCGGCCACGCGGTTGCCTGCAGAGCAACTCTACTCCCGTTCAAATC
GGGAACTTAGCTtgg
Downstream region at tRNA end position 
gggactatgc
Secondary structure (Cloverleaf model)
>WENV170686848	Cys	GCA
                   t      Ttgg gggactatgc
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     A G G G C     A
        G A        G      | | | | |     A
      C     G G C G       T C C C G     C
      G       | | |                 T T
      G     A C G C
        C C        G     TCTAC
                    G - C
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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