The detailed information of tRNA gene sequence


Sequence ID>WENV170686868
Genome IDLFRM01168044
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5164
End posion on genome 5238
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaacaatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCGAATC
TTGCCTCCGCAACTA
Downstream region at tRNA end position 
tcagaaaacc
Secondary structure (Cloverleaf model)
>WENV170686868	Met	CAT
                   t      ACTA tcagaaaacc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T T C     A
        G A        G      | + | | |     G
      T     C G A G       G T A A G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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