The detailed information of tRNA gene sequence


Sequence ID>WENV170686899
Genome IDLFRM01168825
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 578
End posion on genome 653
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aaataaatat
tRNA gene sequence 
GATCCATTAGCTCAGTCGGTAGAGCACCTGACTTTTAATCAGGGTGTCCCGCGTTCGAGT
CGCGGATGGATCACCA
Downstream region at tRNA end position 
atggagaagt
Secondary structure (Cloverleaf model)
>WENV170686899	Lys	TTT
                   t      ACCA atggagaagt
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G C G C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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