The detailed information of tRNA gene sequence


Sequence ID>WENV170686917
Genome IDLFRM01169387
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 148
End posion on genome 72
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccatttatat
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCAACGGACTTCTAATCCGTAGGCCAGGGGTTCGAA
TCCCTTCAGGCGCGCCA
Downstream region at tRNA end position 
ttagctttgt
Secondary structure (Cloverleaf model)
>WENV170686917	Arg	TCT
                   t      GCCA ttagctttgt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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