The detailed information of tRNA gene sequence


Sequence ID>WENV170686946
Genome IDLFRM01170342
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3136
End posion on genome 3210
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
acccaattgt
tRNA gene sequence 
GCGGGACTAACTCAGTGGTAGAGTGTCACCTTGCCAAGGTGAAAGTCGCGAGTTCGAATC
TCGTGTCCCGCTCCA
Downstream region at tRNA end position 
cagcttggcc
Secondary structure (Cloverleaf model)
>WENV170686946	Gly	GCC
                   t      TCCA cagcttggcc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G          T A
                    T     T G C T C     A
        G A        A      + | | | |     G
      T     C T C A       G C G A G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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