The detailed information of tRNA gene sequence


Sequence ID>WENV170686963
Genome IDLFRM01171002
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 362
End posion on genome 437
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agccatattt
tRNA gene sequence 
GACCCATTAGCTCAGGCGGTAGAGCACTTGACTTTTAATCAAGGTGTCCGGAGTTCGAGT
CTCCGATGGGTCACCA
Downstream region at tRNA end position 
aatcctgttc
Secondary structure (Cloverleaf model)
>WENV170686963	Lys	TTT
                   t      ACCA aatcctgttc
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G C C T C     A
      G G A        A      | | | | |     G
    C       C T C G       C G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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