The detailed information of tRNA gene sequence


Sequence ID>WENV170686976
Genome IDLFRM01171290
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3425
End posion on genome 3499
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caaaacaagt
tRNA gene sequence 
GGCCCATTCGTCTAGCGGTTAGGACACCGCCCTTTCACGGCGGTAACACGAGTTCGAGTC
TCGTATGGGTCACCA
Downstream region at tRNA end position 
tcttttcttc
Secondary structure (Cloverleaf model)
>WENV170686976	Glu	TTC
                   t      ACCA tcttttcttc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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