The detailed information of tRNA gene sequence


Sequence ID>WENV170687003
Genome IDLFRM01172933
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3235
End posion on genome 3159
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgactaatcc
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGTTAGAGCGCGTCCCTGATAAGGACGAGGTCCCTGGTTCGAT
TCCAGGCACGCCCACCA
Downstream region at tRNA end position 
gttgagtcgc
Secondary structure (Cloverleaf model)
>WENV170687003	Ile	GAT
                   c      ACCA gttgagtcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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