The detailed information of tRNA gene sequence


Sequence ID>WENV170687019
Genome IDLFRM01173483
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 219
End posion on genome 145
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccctgcacaa
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTTTCATTCTTGAAAGAGGAGTTCGATTC
TCCTATGGGCTACTA
Downstream region at tRNA end position 
ataaaaagga
Secondary structure (Cloverleaf model)
>WENV170687019	Glu	TTC
                   a      ACTA ataaaaagga
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C T C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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