The detailed information of tRNA gene sequence


Sequence ID>WENV170687024
Genome IDLFRM01173597
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1811
End posion on genome 1735
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agatataaat
tRNA gene sequence 
TCTTCCTTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAG
TCCAAGAGGAAGAGCAA
Downstream region at tRNA end position 
aatatcctga
Secondary structure (Cloverleaf model)
>WENV170687024	Asn	GTT
                   t      GCAA aatatcctga
                     T - A
                     C - G
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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