The detailed information of tRNA gene sequence


Sequence ID>WENV170687034
Genome IDLFRM01174037
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7098
End posion on genome 7190
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtaatgacg
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCGGTCGACTCGAAATCGACTAGGCGGTGATGAGCC
GTCTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttaagaaat
Secondary structure (Cloverleaf model)
>WENV170687034	Ser	CGA
                   g      GCCA tttaagaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGTGATGAGCCGTCTC
                    G - C
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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