The detailed information of tRNA gene sequence


Sequence ID>WENV170687040
Genome IDLFRM01174526
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1972
End posion on genome 1898
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ctcggtttat
tRNA gene sequence 
TCCAAGGTAGCTCAATGGTGGAGCACTCGGCTGTTAACCGATAGGCTGTGGGTTCGAGTC
CCACCCTTGGAGCCA
Downstream region at tRNA end position 
aaacttgggt
Secondary structure (Cloverleaf model)
>WENV170687040	Asn	GTT
                   t      GCCA aaacttgggt
                     T - A
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T G
                    T     C A C C C     A
        A A        A      | | | | |     G
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     AGGCT
                    C   T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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