The detailed information of tRNA gene sequence


Sequence ID>WENV170687068
Genome IDLFRM01175380
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 35397
End posion on genome 35482
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gcacaagcat
tRNA gene sequence 
GCGGGGGTAGTCAAGCTGGACAACGGCGCGGGACTTAAGATCCCGTCCTTAGTGGTTCAT
GGGTTCGAATCCCATCCCCCGCACCA
Downstream region at tRNA end position 
tttttcgttc
Secondary structure (Cloverleaf model)
>WENV170687068	Leu	TAA
                   t      ACCA tttttcgttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
    T C G A        A      | | | | |     G
  G         A C T G       A T G G G     C
  G           | + |                 T T
  A         C G G C
    C A A          G     TCCTTAGTGGTTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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