The detailed information of tRNA gene sequence


Sequence ID>WENV170687123
Genome IDLFRM01177326
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2076
End posion on genome 2001
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttgtcgccat
tRNA gene sequence 
GCCCCCTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCGACAGTTCGATT
CTGTCAGGGGGCTCCA
Downstream region at tRNA end position 
ttcttttgtc
Secondary structure (Cloverleaf model)
>WENV170687123	Thr	GGT
                   t      TCCA ttcttttgtc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     C T G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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