The detailed information of tRNA gene sequence


Sequence ID>WENV170687125
Genome IDLFRM01177326
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1798
End posion on genome 1723
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgcgcgacga
tRNA gene sequence 
AGGGGCGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT
CCTGTCGCCCCTGCAA
Downstream region at tRNA end position 
taccccttac
Secondary structure (Cloverleaf model)
>WENV170687125	Trp	CCA
                   a      GCAA taccccttac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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