The detailed information of tRNA gene sequence


Sequence ID>WENV170687163
Genome IDLFRM01180208
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 240
End posion on genome 166
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
aaaattgcaa
tRNA gene sequence 
GCGGGAATAACTCAGTGGTAGAGTGCAACCTTGCCAAGGTTGAAGTCGCGAGTTCGAATC
TCGTTTCCCGCTCCA
Downstream region at tRNA end position 
aagagactcc
Secondary structure (Cloverleaf model)
>WENV170687163	Gly	GCC
                   a      TCCA aagagactcc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T G C T C     A
        G A        A      + | | | |     G
      T     C T C A       G C G A G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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