The detailed information of tRNA gene sequence


Sequence ID>WENV170687164
Genome IDLFRM01180221
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 444
End posion on genome 533
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtatggccat
tRNA gene sequence 
GGAGACGTGCCAGAGCGGCCGAATGGGGCTCACTGCTAATGAGTTGTCCTCTTAACGGAG
GACCGGAGGTTCAAATCCTCTCGTCTCCGCtc
Downstream region at tRNA end position 
cttcaactcc
Secondary structure (Cloverleaf model)
>WENV170687164	Ser	GCT
                   t      GCtc cttcaactcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    G       G A C C       G G A G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTCCTCTTAACGGAGGACC
                    G + T
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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