The detailed information of tRNA gene sequence


Sequence ID>WENV170687168
Genome IDLFRM01180696
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2159
End posion on genome 2084
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnatg
tRNA gene sequence 
GTGGCTGTAGTTCAGCTGGTAGAGCACCAGGTTGTGATCCTGGGTGTCGCGGGTTCGAGC
CCCGTCAGCCACCCCG
Downstream region at tRNA end position 
aagaagaagc
Secondary structure (Cloverleaf model)
>WENV170687168	His	GTG
                   g      CCCG aagaagaagc
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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