The detailed information of tRNA gene sequence


Sequence ID>WENV170687173
Genome IDLFRM01180864
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1099
End posion on genome 1172
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
acgaggctgc
tRNA gene sequence 
GCCCCCTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCGTCAGTTCGATT
CTGACAGGGGGCTCtg
Downstream region at tRNA end position 
ttctttttat
Secondary structure (Cloverleaf model)
>WENV170687173	Thr	GGT
                   c      TCtg ttctttttat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     C A G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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