The detailed information of tRNA gene sequence


Sequence ID>WENV170687197
Genome IDLFRM01181933
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 342
End posion on genome 267
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tccacagcgc
tRNA gene sequence 
GGGCCAATAGCTCAATTGGTAGAGCATCTGACTCTTAATCAGCAGGTTCAAGGTTCGATT
CCTTGTTGGCCCACCA
Downstream region at tRNA end position 
gactgcctaa
Secondary structure (Cloverleaf model)
>WENV170687197	Lys	CTT
                   c      ACCA gactgcctaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T T
                    T     G T T C C     A
      T A A        A      | | | | |     G
    T       C T C G       C A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    T   C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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