The detailed information of tRNA gene sequence


Sequence ID>WENV170687202
Genome IDLFRM01182343
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 35722
End posion on genome 35638
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttaaggcga
tRNA gene sequence 
GCCGGGATAGTCTAGTCCGGGAAGGCGGTGGCCTTGAAAGCCACTGGTGCTTGGCACCTC
GGGAGTTCAAATCTCCCTCCCGGCGtat
Downstream region at tRNA end position 
tctgtttacg
Secondary structure (Cloverleaf model)
>WENV170687202	Ser	TGA
                   a      Gtat tctgtttacg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGCTTGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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