The detailed information of tRNA gene sequence


Sequence ID>WENV170687218
Genome IDLFRM01183351
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2370
End posion on genome 2295
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttctcagcct
tRNA gene sequence 
GCGGATTTAGCTCATCTGGTAGAGCGCGACCTTGCCAAGGTCGAGGTAGCGGGTTCGAGC
CCCGTAATCCGCTCCA
Downstream region at tRNA end position 
aatattgcgg
Secondary structure (Cloverleaf model)
>WENV170687218	Gly	GCC
                   t      TCCA aatattgcgg
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A          C G
                    T     T G C C C     A
      C T A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    C - G
                    G - C
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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