The detailed information of tRNA gene sequence


Sequence ID>WENV170687220
Genome IDLFRM01183351
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2047
End posion on genome 1974
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ggaaatatac
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATCCCCGGTTCGAGTCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
aaaaagcact
Secondary structure (Cloverleaf model)
>WENV170687220	Cys	GCA
                   c      TCCA aaaaagcact
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T G
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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