The detailed information of tRNA gene sequence


Sequence ID>WENV170687225
Genome IDLFRM01183918
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 106
End posion on genome 179
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaatcgccga
tRNA gene sequence 
GCCCCAGTAGCTCAGCGGATAGAGCAACAGCCTTCTAATCTGTCGTGCGCAGGTTCGATT
CCTGCCTGGGGCGCtt
Downstream region at tRNA end position 
gttgaggttg
Secondary structure (Cloverleaf model)
>WENV170687225	Arg	TCT
                   a      GCtt gttgaggttg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      C G A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     CGTGC
                    A - T
                    C - G
                    A - T
                    G - C
                    C   T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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