The detailed information of tRNA gene sequence


Sequence ID>WENV170687227
Genome IDLFRM01184018
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 505
End posion on genome 429
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aagtatccac
tRNA gene sequence 
GGGCCTGTGGTCTAGCTGGTTATGACGTCGCCCTTACACGGCGAAGATCTCCGGTTCGAA
TCCGGACAGGCCCATCA
Downstream region at tRNA end position 
atttttcgca
Secondary structure (Cloverleaf model)
>WENV170687227	Val	TAC
                   c      ATCA atttttcgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A G G C C     A
      C G A        G      | | | | |     G
    T       T C T G       T C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK