The detailed information of tRNA gene sequence


Sequence ID>WENV170687233
Genome IDLFRM01184419
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 243
End posion on genome 168
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agggtgtttt
tRNA gene sequence 
GAGCCATTAGCTCAGCCGGTAGAGCACCTGACTTTTAATCAGGGTGTCCCGCGTTCGAGT
CGCGGATGGCTCACCA
Downstream region at tRNA end position 
tgcggcccct
Secondary structure (Cloverleaf model)
>WENV170687233	Lys	TTT
                   t      ACCA tgcggcccct
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G C G C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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