The detailed information of tRNA gene sequence


Sequence ID>WENV170687237
Genome IDLFRM01184521
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 42989
End posion on genome 42916
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ccgaccattt
tRNA gene sequence 
GCAGGTATAGTTTAATGGTAGAACATCAGCCTTCCAAGCTGAATGTGCGAGTTCGATTCT
CGTTACCTGCTCCA
Downstream region at tRNA end position 
attgaaattt
Secondary structure (Cloverleaf model)
>WENV170687237	Gly	TCC
                   t      TCCA attgaaattt
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     T G C T C     A
        A A        A      + | | | |     G
      T     T T T G       G C G A G     C
      G     + | | |                 T T
      G     G A A C
        T A        A     ATGT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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